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Coronavirus / COVID-19 : general fact-based reporting
#2521
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In terms of heterogeneous responses: this is true for ALL infectious diseases, and it's something we don't fully understand in any. It could be the number of receptors for viral entry (ACE-2), it could be primed or misprimed immunity. It could be pathogen load. For sure, healthcare workers do seem to have worse outcomes than non-healthcare workers with similar age profiles. It could be that repeated exposure before onset of protective adaptive immunity is to blame, it could be just pathogen load or the combination of the two. I don't buy the 'doctors immune systems are almost ready to go haywire' theory...in fact, when I compare myself with my family, I tend to get less severe bouts of whatever tends to be going round. Part of that may be borderline obsessive hand washing as part of my routine, but also part of it may be that my immune system has 'sampled' far more pathogens than my family members. Of course, with SARS-CoV2, that is probably not much help, since we've never seen anything quite like it.
tb
Last edited by nk15; Feb 23, 2020 at 10:03 am
#2522
Join Date: Dec 2007
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No idea to both of the above posts...but it may make sense. I'm trying not to post too regularly, but will read the thread from time to time...so apologies if I don't respond to all posts. I just wanted to reiterate my strongly held opinion that nothing we've seen about COVID-19 suggests it's a "unique" disease, or that SARS-CoV2 is somehow very different any other known virus.
One thing IS different, however, and may well make a material impact. In modern times, we've never had a pandemic due to a virus with zero host immunity (assuming no cross-immunity, positive or negative from other coronaviruses). And yes, this may well explain some of the paradox we are seeing in exposure within context of low prevalence (which would lead to a single discrete exposure) and possibly repeated exposures in a short space of time before onset o protective immunity in places of high prevalence.
However, the Diamond Princess would also be a model of the latter. I think we can all assume now that quarantine was ineffective, despite the Japanese stance. Although the (lowish) number of new cases amongst the quarantined pax (as opposed to crew) suggests it was more effective than e.g. I had feared. From what we know, about 5% of the DP cases were "severe", and this is amongst a population that was very heavily weighted towards older age and co-morbidities. I assume that prior to quarantine in early Feb, if there were several hundred cases on-board, those people did get 'multiple exposures', but no evidence, as yet, that this led to catastrophic outcomes...
much still to learn.
tb
One thing IS different, however, and may well make a material impact. In modern times, we've never had a pandemic due to a virus with zero host immunity (assuming no cross-immunity, positive or negative from other coronaviruses). And yes, this may well explain some of the paradox we are seeing in exposure within context of low prevalence (which would lead to a single discrete exposure) and possibly repeated exposures in a short space of time before onset o protective immunity in places of high prevalence.
However, the Diamond Princess would also be a model of the latter. I think we can all assume now that quarantine was ineffective, despite the Japanese stance. Although the (lowish) number of new cases amongst the quarantined pax (as opposed to crew) suggests it was more effective than e.g. I had feared. From what we know, about 5% of the DP cases were "severe", and this is amongst a population that was very heavily weighted towards older age and co-morbidities. I assume that prior to quarantine in early Feb, if there were several hundred cases on-board, those people did get 'multiple exposures', but no evidence, as yet, that this led to catastrophic outcomes...
much still to learn.
tb
#2523
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A few musings:
The number of new cases in non-Hubei mainland China is now negligible (18), but Hubei is still continuing to report several hundred cases: represents less than 1% growth/ day but not close to zero.
No-one in the Chinese gov seems to have read the memo that this COVID-19 is now an international pandemic in all but name, so efforts at containment and eradication are futile. Why this may be important is that the policy of trying to identify every case in a place with a high prevalence (i.e. Hubei) may actually be facilitating transmission rather than the other way around. On the flip side, in places with low prevalence, mass self-isolation, and identifying cases appears to be an effective strategy. This might provide a model for every other country on the planet in the coming weeks and months: in the early stages of local transmission, a few hundred cases being likely, trying to identify cases aggressively may be effective in limiting onward transmission: SG, and to an extent the UK are great examples of this in action. But once cases start growing exponentially in a sustained fashion, focusing only on severely ill people should become the priority: all other symptomatic cases who are not severely ill should be mandated (if at all possible, otherwise strongly encouraged) to self-isolate to limit onward transmission. This won't halt spread, since some people are so mildly symptomatic or asymptomatic, but it will slow things down.
2. Chinese compliance has been extraordinary. Not to say some (many) people aren't frustrated, or even angry. But, by and large, people have obeyed. But that's because China essentially operates under social contract. What no-one in China has realised, is that all of this extraordinary effort has basically delayed the spread to all major non-Hubei hubs. Complete containment in China has absolutely no effect (weather and other unknown factors aside) if there is lack of containment globally. It's one thing to suffer for a month, or even two, as recompense for averting catastrophe, but at some point, life has to go on in some semblance. If that life involves China opening its doors to the rest of the world, we'll just have the same situation that was trying to be avoided. However, I do think lessons have been learnt that will mitigate the rate of spread once COVID-19 becomes re-established in CHina, which I think is sadly inevitable.
tb
The number of new cases in non-Hubei mainland China is now negligible (18), but Hubei is still continuing to report several hundred cases: represents less than 1% growth/ day but not close to zero.
No-one in the Chinese gov seems to have read the memo that this COVID-19 is now an international pandemic in all but name, so efforts at containment and eradication are futile. Why this may be important is that the policy of trying to identify every case in a place with a high prevalence (i.e. Hubei) may actually be facilitating transmission rather than the other way around. On the flip side, in places with low prevalence, mass self-isolation, and identifying cases appears to be an effective strategy. This might provide a model for every other country on the planet in the coming weeks and months: in the early stages of local transmission, a few hundred cases being likely, trying to identify cases aggressively may be effective in limiting onward transmission: SG, and to an extent the UK are great examples of this in action. But once cases start growing exponentially in a sustained fashion, focusing only on severely ill people should become the priority: all other symptomatic cases who are not severely ill should be mandated (if at all possible, otherwise strongly encouraged) to self-isolate to limit onward transmission. This won't halt spread, since some people are so mildly symptomatic or asymptomatic, but it will slow things down.
2. Chinese compliance has been extraordinary. Not to say some (many) people aren't frustrated, or even angry. But, by and large, people have obeyed. But that's because China essentially operates under social contract. What no-one in China has realised, is that all of this extraordinary effort has basically delayed the spread to all major non-Hubei hubs. Complete containment in China has absolutely no effect (weather and other unknown factors aside) if there is lack of containment globally. It's one thing to suffer for a month, or even two, as recompense for averting catastrophe, but at some point, life has to go on in some semblance. If that life involves China opening its doors to the rest of the world, we'll just have the same situation that was trying to be avoided. However, I do think lessons have been learnt that will mitigate the rate of spread once COVID-19 becomes re-established in CHina, which I think is sadly inevitable.
tb
But as you pointed out earlier, a major benefit of all these containment efforts, even if eventually futile at containment and at great cost, is to slow things down substantially, until we (a) study and learn more about the virus, (b) develop prevention/immunization and treatment methods, if any (c) prepare infrastructures within China and around the world for dealing with it, and (d) allowing for warm weather or other unknown factors to kick in to aid halting the spread or eradicating the virus, if we are lucky.
In other words, it may still worth it to continue strong containment efforts, even at a substantial cost. (But as for identifying every single case in Hubei, this is a tactical decision that may be ineffective/harmful, as you said, and/or executed wrongly).
#2524
Join Date: Jul 2011
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(second bolding above mine)
But as you pointed out earlier, a major benefit of all these containment efforts, even if eventually futile at containment and at great cost, is to slow things down substantially, until we (a) study and learn more about the virus, (b) develop prevention/immunization and treatment methods, if any (c) prepare infrastructures within China and around the world for dealing with it, and (d) allowing for warm weather or other unknown factors to kick in to aid halting the spread or eradicating the virus, if we are lucky.
In other words, it may still worth it to continue strong containment efforts, even at a substantial cost. (But as for identifying every single case in Hubei, this is a tactical decision that may be ineffective/harmful, as you said, and/or executed wrongly).
But as you pointed out earlier, a major benefit of all these containment efforts, even if eventually futile at containment and at great cost, is to slow things down substantially, until we (a) study and learn more about the virus, (b) develop prevention/immunization and treatment methods, if any (c) prepare infrastructures within China and around the world for dealing with it, and (d) allowing for warm weather or other unknown factors to kick in to aid halting the spread or eradicating the virus, if we are lucky.
In other words, it may still worth it to continue strong containment efforts, even at a substantial cost. (But as for identifying every single case in Hubei, this is a tactical decision that may be ineffective/harmful, as you said, and/or executed wrongly).
#2525
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If China, the country where this all started and where the most cases are, does actually manage to successfully contain this and stamp out every last case, then there are zero excuses for the rest of the world being unable to accomplish the same. If it's possible to stamp out every last case of this virus despite the fact that it got a 3-4 week headstart because of the stupidity of some local officials and spread to a few thousand cases before they locked down the city (and had hundreds of thousands flee to other areas before the lockdown), then there's absolutely no reason why it cannot be contained and stopped in the rest of the world at this point.
https://www.times-standard.com/2020/...e-know-so-far/
The other individual is also making progress toward recovery, county public health officer Dr. Teresa Frankovich said Friday. Officials are still waiting for testing samples sent to the Centers for Disease Control and Prevention to return with results indicating whether the second individual also has the virus.
...
Both individuals had traveled to mainland China recently, but neither was screened at the Humboldt County airport in McKinleyville at any point. Both were evaluated locally, but tests were conducted differently for each, Frankovich said.
...
There’s currently no official timeline for when the second individual’s samples may return.
“The CDC is getting a lot of samples,” Frankovich said. “We’re sending them in from a relatively rural area … we can certainly expect additional information next week.”
...
Both individuals had traveled to mainland China recently, but neither was screened at the Humboldt County airport in McKinleyville at any point. Both were evaluated locally, but tests were conducted differently for each, Frankovich said.
...
There’s currently no official timeline for when the second individual’s samples may return.
“The CDC is getting a lot of samples,” Frankovich said. “We’re sending them in from a relatively rural area … we can certainly expect additional information next week.”
https://www.cdc.gov/media/releases/2...-covid-19.html
In terms of the test kits, you know what, i think we’ve been as transparent as one could be about this issue. I’m happy to report that we’re fully stood up at CDC. There is no lag time for testing at this point. That is the focus of testing in the united states, the testing here at CDC. We’ve had no issues at all in terms of the quality of that. As we’ve pushed tests out to the state, they did what we would expect as part of the normal procedures, which is do the verification in their own laboratories. There were problems identified with the test kits. That is a normal part, unfortunately, of these processes. We obviously would not want to use anything but the most perfect possible kits, since we’re making determinations about whether people have COVID-19 or not. So that is still where we are. We are working with FDA, who is the one that have oversight over us. Under this e.u.a. on redoing some of the kits. We still consider it a priority to get the kits out to patients as soon as possible.
#2526
Join Date: Dec 2007
Location: PEK and BOS
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Posts: 4,531
If China, the country where this all started and where the most cases are, does actually manage to successfully contain this and stamp out every last case, then there are zero excuses for the rest of the world being unable to accomplish the same. If it's possible to stamp out every last case of this virus despite the fact that it got a 3-4 week headstart because of the stupidity of some local officials and spread to a few thousand cases before they locked down the city (and had hundreds of thousands flee to other areas before the lockdown), then there's absolutely no reason why it cannot be contained and stopped in the rest of the world at this point.
Now, if China does manage to contain COVID-19 that would be an incredible and unprecedented achievement. Unfortunately, I don't think it means the rest of the world even has the capability and resources to be even remotely close to replicating. Even if money were no object, the US/ EU and China would need to cough up maybe $10 trillion (plucking a number out of a hat) to finance this...
tb
#2527
Join Date: Jul 2011
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1.4B people under authority of a single, all-powerful centralised gov that can command incredible resources and doesn't care about other (non-pol) fall-out. Versus 6B in >190 disparate states of varying competence and autonomy and >4.5B in states with poor healthcare and other infra-structure, and the other 1.5B in countries where individualism and personal wealth take (psychological) precedence over notions of the greater good (I'm over-generalising, apologies). Not to mention orders of magnitude difference in access/ land areas/ number of cities etc
Now, if China does manage to contain COVID-19 that would be an incredible and unprecedented achievement. Unfortunately, I don't think it means the rest of the world even has the capability and resources to be even remotely close to replicating. Even if money were no object, the US/ EU and China would need to cough up maybe $10 trillion (plucking a number out of a hat) to finance this...
tb
Now, if China does manage to contain COVID-19 that would be an incredible and unprecedented achievement. Unfortunately, I don't think it means the rest of the world even has the capability and resources to be even remotely close to replicating. Even if money were no object, the US/ EU and China would need to cough up maybe $10 trillion (plucking a number out of a hat) to finance this...
tb
#2528
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Join Date: Mar 2000
Posts: 17,424
If China, the country where this all started and where the most cases are, does actually manage to successfully contain this and stamp out every last case, then there are zero excuses for the rest of the world being unable to accomplish the same. If it's possible to stamp out every last case of this virus despite the fact that it got a 3-4 week headstart because of the stupidity of some local officials and spread to a few thousand cases before they locked down the city (and had hundreds of thousands flee to other areas before the lockdown), then there's absolutely no reason why it cannot be contained and stopped in the rest of the world at this point.
#2529
Join Date: Dec 2007
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Posts: 4,531
Well I can see one possible scenario where some areas succeed in stamping out the outbreaks and prevent unabated community spread and others do not, and the world actually fragments into two different zones, with movement not allowed from the areas with unabated community spread to areas with this under control except by going through 2+ weeks of quarantine. At that point, these other zones won't have a choice. Either they get rid of it or they can't join the rest of the world again until they do.
Eradication with the aid of a vaccine may be possible, however. If that does become the case, it shows that other infectious diseases (e.g. polio) could be easily eradicated with enough resources and political will: this event may even end up being a net positive for the planet.
tb
#2530
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I'd like to understand how the Wuhan Princess cases are counted. I assume that if someone has left the ship at the end of the "quarantine" and is diagnosed in Japan, it counts as a Japan case, while if someone (including those on the evacuation flights) is diagnosed while physically present in some other country, it could count as a confirmed case in that country, even if the person had obviously contracted the WuFlu while on the ship.
However, there were supposedly the fourteen infected Americans on the evacuation flight, who don't seem to be included in the USA numbers, assuming that the twenty proposed transfers from northern to Southern California are people who are newly diagnosed at the quarantine center. IIRC most of the fourteen (twelve or thirteen of them) were taken to the Nebraska containment facilities and I don't think there was a jump in the number of USA confirmed cases when the evacuation flights arrived.
When it becomes time to tabulate the Wuhan Princess outcomes, I would expect statistically different results depending on where the people are ultimately treated, which in many cases is determined by their citizenship/residency.
BTW, the people who were evacuated from Wuhan by the Americans, Brits, etc. seem to generally have done pretty well with surprisingly few infections discovered during their quarantine periods. To me, this is suggesting that the virus was much more prevalent in higher concentrations on the ship than in central Wuhan, which I guess isn't surprising given the differences in the overall infection rates observed for these two populations, even recognizing that the Wuhan Princess represents a relatively small sample size.
However, there were supposedly the fourteen infected Americans on the evacuation flight, who don't seem to be included in the USA numbers, assuming that the twenty proposed transfers from northern to Southern California are people who are newly diagnosed at the quarantine center. IIRC most of the fourteen (twelve or thirteen of them) were taken to the Nebraska containment facilities and I don't think there was a jump in the number of USA confirmed cases when the evacuation flights arrived.
When it becomes time to tabulate the Wuhan Princess outcomes, I would expect statistically different results depending on where the people are ultimately treated, which in many cases is determined by their citizenship/residency.
BTW, the people who were evacuated from Wuhan by the Americans, Brits, etc. seem to generally have done pretty well with surprisingly few infections discovered during their quarantine periods. To me, this is suggesting that the virus was much more prevalent in higher concentrations on the ship than in central Wuhan, which I guess isn't surprising given the differences in the overall infection rates observed for these two populations, even recognizing that the Wuhan Princess represents a relatively small sample size.
#2531
Join Date: Oct 2007
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I'd like to understand how the Wuhan Princess cases are counted. I assume that if someone has left the ship at the end of the "quarantine" and is diagnosed in Japan, it counts as a Japan case, while if someone (including those on the evacuation flights) is diagnosed while physically present in some other country, it could count as a confirmed case in that country, even if the person had obviously contracted the WuFlu while on the ship.
However, there were supposedly the fourteen infected Americans on the evacuation flight, who don't seem to be included in the USA numbers, assuming that the twenty proposed transfers from northern to Southern California are people who are newly diagnosed at the quarantine center. IIRC most of the fourteen (twelve or thirteen of them) were taken to the Nebraska containment facilities and I don't think there was a jump in the number of USA confirmed cases when the evacuation flights arrived.
When it becomes time to tabulate the Wuhan Princess outcomes, I would expect statistically different results depending on where the people are ultimately treated, which in many cases is determined by their citizenship/residency.
BTW, the people who were evacuated from Wuhan by the Americans, Brits, etc. seem to generally have done pretty well with surprisingly few infections discovered during their quarantine periods. To me, this is suggesting that the virus was much more prevalent in higher concentrations on the ship than in central Wuhan, which I guess isn't surprising given the differences in the overall infection rates observed for these two populations, even recognizing that the Wuhan Princess represents a relatively small sample size.
However, there were supposedly the fourteen infected Americans on the evacuation flight, who don't seem to be included in the USA numbers, assuming that the twenty proposed transfers from northern to Southern California are people who are newly diagnosed at the quarantine center. IIRC most of the fourteen (twelve or thirteen of them) were taken to the Nebraska containment facilities and I don't think there was a jump in the number of USA confirmed cases when the evacuation flights arrived.
When it becomes time to tabulate the Wuhan Princess outcomes, I would expect statistically different results depending on where the people are ultimately treated, which in many cases is determined by their citizenship/residency.
BTW, the people who were evacuated from Wuhan by the Americans, Brits, etc. seem to generally have done pretty well with surprisingly few infections discovered during their quarantine periods. To me, this is suggesting that the virus was much more prevalent in higher concentrations on the ship than in central Wuhan, which I guess isn't surprising given the differences in the overall infection rates observed for these two populations, even recognizing that the Wuhan Princess represents a relatively small sample size.
14 cases USA, from individuals traveled from China (12) plus person-to-person/spouse transfer (2). Scattered over the country but most in California.
3 cases from Wuhan evacuees, out of total of 743 (approx) evacuated on 5 flights and placed at bases March, Travis, Miramar, Lackland, Ashland. Sick/positive testing evacuees in hospital near Miramar (2) and Lackland.(1)
18 cases from Diamond Princess, out of total of 329, evacuated on 2 flights and placed at Travis, Lackland. Ill and positive evacuees at Travis (5), Lackland (2) and Nebraska special unit (11).
There is overlap between the 14 "confirmations" given by the Japanese at the last minute before the flights left Japan, and the 18 CDC-listed cases, but it seems that only 12 or 13 of the 14 have been confirmed by the CDC and 1 or 2 so far are negative. Implying at least a false positve or two from the Japanese testing. Then there are a few others who the Japanese tested negative and who flew back, then subsequently tested positive. Whether they came back harboring the virus (false negative) or whether they caught it on the flight back, we'll never know. I personally lean toward the former, and consider all the testing the Japanese did, as suspect. I'd have considered all 329 people on that flight as potentially positive, not "healthy and cleared" based on Japanese quarantine and testing, which seems to have been cursory at best.
Basically, the 35 cases officially listed for the USA include the Wuhan and D.P. transferrees. However, I don't know if the 14 positives found by the Japanese are also included (double-counted) in the Diamond Princess official numbers.
The whole thing about the transfer from Travis to southern California sounds confused. The locals in southern California supposedly heard about this on Thursday evening, yet CDC in the Friday teleconference never mentioned anything about transfers, about extra people testing positive, etc. And on Friday evening or Saturday morning professed to not know anything about it. Perhaps we will hear more about this on Monday. I cannot imagine why they would want to move people from Travis area--either quarantine without symptoms and without positive test, or confirmed positives.
I said in some upthread post that I'd much rather face the situation in Wuhan cocooned in an apartment, vs being stuck on the Diamond Princess, due to having more control over the situation and surroundings. I think the comparative numbers above of Wuhan vs D.P. evacuees, is validation.
Last edited by jiejie; Feb 23, 2020 at 3:18 pm
#2532
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That medical podcast discussed a recent journalistic article about research on bats finding that bats harbor 400 types of coronaviruses, some of which allegedly seem to jump directly to humans, without an intermediately host. Sounds alarming.
https://www.npr.org/sections/goatsan...ers-arent-rare
https://www.npr.org/sections/goatsan...ers-arent-rare
#2533
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So, Austria closed it's border to train traffic from Italy today.
#2534
Join Date: Dec 2016
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Posts: 487
(second bolding above mine)
But as you pointed out earlier, a major benefit of all these containment efforts, even if eventually futile at containment and at great cost, is to slow things down substantially, until we (a) study and learn more about the virus, (b) develop prevention/immunization and treatment methods, if any (c) prepare infrastructures within China and around the world for dealing with it, and (d) allowing for warm weather or other unknown factors to kick in to aid halting the spread or eradicating the virus, if we are lucky.
In other words, it may still worth it to continue strong containment efforts, even at a substantial cost. (But as for identifying every single case in Hubei, this is a tactical decision that may be ineffective/harmful, as you said, and/or executed wrongly).
But as you pointed out earlier, a major benefit of all these containment efforts, even if eventually futile at containment and at great cost, is to slow things down substantially, until we (a) study and learn more about the virus, (b) develop prevention/immunization and treatment methods, if any (c) prepare infrastructures within China and around the world for dealing with it, and (d) allowing for warm weather or other unknown factors to kick in to aid halting the spread or eradicating the virus, if we are lucky.
In other words, it may still worth it to continue strong containment efforts, even at a substantial cost. (But as for identifying every single case in Hubei, this is a tactical decision that may be ineffective/harmful, as you said, and/or executed wrongly).
I know this is going slightly off-topic but it is interesting and concerning to see how things are playing out in Italy - mass panic, stockpiling food, trains being prevented from running because a couple of passengers have coryzal symptomse etc. This kind of mass panic is really not the best response to a global challenge like coronavirus (which will be a marathon, not a sprint) and only serves to instil unhelpful fear. And people who are afraid are more susceptible to believing "fake news" and foolish behaviours which could, paradoxically, put them at greater risk of harm.
#2535
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I'd like to understand how the Wuhan Princess cases are counted. I assume that if someone has left the ship at the end of the "quarantine" and is diagnosed in Japan, it counts as a Japan case, while if someone (including those on the evacuation flights) is diagnosed while physically present in some other country, it could count as a confirmed case in that country, even if the person had obviously contracted the WuFlu while on the ship.
seems to be counting DP cases in Japan separately. For a while they also excluded the infected 14 from the US count and had a footnote explaining that the did that to accurately reflect community spread in the country. Not sure at this time if the 14 are now included in the 35 for the US or in the DP count. And what happens if/when a “safe” DP in Japan gets sick.