I've done this before. You'll have no issues since you're connecting. The Yotel while past passport control, is outside security. (Security is done before entering the specific concourse departing out of) The real issue is for those originating at CDG. They need to pass the main passport exit control before it closes. For those connecting theres always a passport control agent to allow one to transfer from Schengen to non-Schengen concourses.