Praise the Lord! I feel so much safer now!

Seriously - you let him copy your ID information? You should have told him that he had no right to do that, that as long as you're not doing anything wrong you shouldn't have to put up with that. Or lie and say you're very careful because of ID theft. Since the rest of his workers seem to dislike him, you'd probably get past him without much hassle.

I'd suggest you file a complaint with TSA and demand that your name be removed from the secondary search list, if it was added (which, unfortunately, is likely). =/

On a side note, how were the lines slow due to the new TSA ID checkers?