Israel imposes visa restrictions on Indians primarily because of concerns over the large number of Indians who live and work in countries that are potentially hostile to Israel. As long as you haven't done a spell working in Saudi or Syria or similar, you'll probably be fine.

The Israeli missions in India are among the most helpful visa offices I have dealt with and can often get a visa processed within 24 hours without many hoops to jump through. Just be straightforward with them and they will always assist.