It's good to be concerned about what is showing up. However, it appears the online system is being manipulated for whatever reason. Be sure to have a copy of your new rate when you check-in just in case you get a FDC that messes up. I was just reading a post about one reservation being changed to show a rate of $1 when a BRG was approved, yet they will be paying much more than that.
Having everything sync'd up is nice, but doesn't happen all the time.