Basically, what a lot of FTers are saying is that the aa.com search engine is not reliable to find the lowest available fare.
Whenever I find a lower fare offered and available on another website (Travelocity, Expedia, Orbitz, etc) I call AA Web Services and tell them the fare code I am looking for and that I couldn't pull it up using aa.com.
75% of the time, web services is able to book the ticket at the lower fare. If Web Services books the ticket, you will receive the on-line booking bonus as well.
AA Web Services: 800-222-2377